Bioconductor Wgcna package

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wgcna WGCNA wgcna package

5.0 years ago coyoung ▴ 10

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wgcna wgcna package modulepreservation

updated 6.1 years ago by Peter Langfelder ★ 3.0k • written 6.1 years ago by bekah ▴ 40

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wgcna wgcna package

6.1 years ago Jack • 0

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wgcna package wgcna

6.2 years ago anni.djurhuus • 0

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wgcna package TCGA LocusLinkID genecode ensembl

updated 6.3 years ago by James W. MacDonald 67k • written 6.3 years ago by modarzi ▴ 10

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wgcna package software error

updated 6.3 years ago by Peter Langfelder ★ 3.0k • written 6.3 years ago by giuseppe0525 • 0

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wgcna wgcna package consensus

6.3 years ago 2323982403 ▴ 60

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wgcna wgcna package

6.4 years ago • updated 6.3 years ago antoinefelden ▴ 10

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WGCNA wgcna package

updated 6.4 years ago by Peter Langfelder ★ 3.0k • written 6.4 years ago by bdy8 ▴ 10

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wgcna wgcna package

6.4 years ago 2323982403 ▴ 60

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WGCNA wgcna package wgcna bicor

6.4 years ago bekah ▴ 40

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wgcna package

updated 6.5 years ago by Peter Langfelder ★ 3.0k • written 6.5 years ago by bekah ▴ 40

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RNA-seq WGCNA package soft power

6.5 years ago modarzi ▴ 10

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Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Great thanks for posting the issue and sticking with it Annaleigh

Comment: Problems with oarfish + tximport + swish by brown.annaleigh • 0

Awesome possum! Update works!! Thank you so much for the help and guidance!

Comment: Postdoctoral Researcher in Spatial Gene Regulatory Networks underlying Stomatal by iqratechnology4 • 0

Iqra Technology is IT Solutions and Services Company. We are salesforce and Microsoft partner company. https://iqratechnology.com/

Comment: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt? by James W. MacDonald 67k

> BTW, shouldn't you be using keep.lib.sizes = F and re-do the calcNormFactors() after filtering of the dglst low-expression ENSGs, as Gord…

Comment: Problems with oarfish + tximport + swish by Michael Love 43k

Let me see if I can add some code to tximeta to cover this case. I've added an argument `skipRanges` in devel branch which should allow: …

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Answer: Error in download.file for TCGAutils::symbolsToRanges

Answer: Differential expression of protein coding ENSGs (Ensembl IDs) | When to biomaRt?

Answer: Limma Interaction Effect with Covariates

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